《植物生理学报》 2011, 47(1): 63-68
通信作者:王喆之;E-mail: zzwang@snnu.edu.cn;Tel: 029-85301260
摘 要:
对丹参 EST 序列进行 Blast 分析, 获得一个新的非特异性脂质转移蛋白基因, 命名为 SmLT P1 (GenB ank 注册号为 EF187461)。该基因 cDNA 全长 593 bp, 包含一个长为 357 bp 的开放读码框, 编码 118 个氨基酸。生物信息学结构分析表 明, 该蛋白具有植物 nsLTP 的典型结构, 即 4 对二硫键, 4 个 α- 螺旋, 1 个可结合和容纳脂肪酸分子的类似口袋状的疏水结 构。实时荧光定量PCR 分析结果表明, SmLTP1 基因在丹参不同组织器官中差异表达, 其表达受病原菌和茉莉酸甲酯的诱 导, 显示SmLTP1 基因在植物防御反应中发挥作用。关键词:丹参; 非特异性脂质转移蛋白; 基因克隆; 生物信息学分析; 实时荧光定量PCR
收稿:2010-09-08 修定:2010-11-17
资助:国家自然科学基金(31000134)和陕西省科技研究发展(攻关)计划(2006K16-G15)。
Corresponding author: WANG Zhe-Zhi; E-mail: zzwang@snnu.edu.cn; Tel: 029-85301260
Abstract:
By analyzing EST sequences of Salvia miltiorrhiza, we found a new gene which showed high homology with plant non-specific lipid transfer proteins and named as SmLTP1 (GenBank accession number: EF187461). SmLTP1 consists of 593 nucleotides, including a single 357-bp opening reading frame and encoding a 118-amino-acid peptide. Bioinformatics analysis showed that SmLTP1 had the typical structure of the plant non-specific lipid transfer protein, including 4 pairs of disulfide, 4 α-helices and 1 tunnel-like hydrophobic cavity which could contain lipid molecules. Quantitative RT-PCR analysis revealed that the gene expressed in different organs, and could be induced by methyl jasmonate (MeJA) and pathogen. These results showed that the SmLTP1 might be pathogen-responsive gene in plant defenses and involve in a complex gene regulation network.Key words: Salvia miltiorrhiza; non-specific lipid transfer proteins; gene clone; bioinformatics analysis; quantitative RT-PCR
此摘要已有 2455 人浏览